STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_018470NifU-related protein. (321 aa)    
Predicted Functional Partners:
TSTA_029440
tRNA splicing protein (Spl1), putative.
  
 0.952
TSTA_111940
Aminotransferase family protein (LolT), putative.
  
 0.936
TSTA_124330
Cysteine desulfurylase, putative.
  
 0.936
TSTA_124840
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.923
TSTA_072650
NADH-quinone oxidoreductase, 23 kDa subunit, putative.
  
  
 0.889
TSTA_085770
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
  
 0.879
TSTA_059320
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.857
TSTA_078070
Iron-sulfur cluster assembly accessory protein Isa1, putative.
  
 
 0.856
TSTA_037380
Iron-sulfur cluster assembly accessory protein Isa2, putative.
  
 
 0.846
TSTA_041370
TLDc domain-containing protein.
  
 
 0.809
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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