STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_014750DNA excision repair protein Rad2. (1128 aa)    
Predicted Functional Partners:
TSTA_089300
3'-5' exonuclease/helicase (Wrn), putative.
   
 0.994
TSTA_075940
RNA polymerase II transcription factor related protein.
    
 0.990
TSTA_124130
DNA repair protein Rhp26/Rad26, putative.
    
 0.987
TSTA_117300
TFIIH complex helicase Ssl2, putative.
    
 0.987
TSTA_086980
TFIIH complex helicase Rad3, putative.
    
 0.977
TSTA_031360
DNA repair protein Mus81, putative.
   
 0.969
TSTA_045690
RNA polymerase TFIIH complex subunit Ssl1, putative.
    
 0.957
TSTA_019830
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.937
TSTA_018950
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.931
TSTA_019020
Vezatin domain-containing protein.
   
 0.931
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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