STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_011100Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (115 aa)    
Predicted Functional Partners:
TSTA_092890
Cell division control protein 2 kinase, putative; Belongs to the protein kinase superfamily.
   
 0.994
TSTA_020900
Cyclin-dependent protein kinase PhoA; Belongs to the protein kinase superfamily.
   
 0.981
TSTA_076380
G2/M-specific cyclin NimE; Belongs to the cyclin family.
   
 0.953
TSTA_053990
G2/mitotic-specific cyclin (Clb3), putative; Belongs to the cyclin family.
   
 0.953
TSTA_066420
Protein kinase domain-containing protein.
   
 0.952
TSTA_087270
Cell division protein kinase (Ctk1), putative.
   
 0.952
TSTA_009420
Serine/threonine protein kinase, putative.
   
 0.952
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Essential component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Controls sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor (By similarity).
    
 0.946
TSTA_011710
Uncharacterized protein.
    
 0.946
TSTA_046380
G1/S-specific cyclin Cln1, putative; Belongs to the cyclin family.
   
 0.929
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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