STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_042860SCP-like extracellular protein, putative; Belongs to the CRISP family. (308 aa)    
Predicted Functional Partners:
TSTA_079850
Nitrate reductase, putative.
     
 0.727
TSTA_088340
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.727
TSTA_004840
Bifunctional purine biosynthetic protein Ade1, putative.
    
  0.648
TSTA_046920
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.634
TSTA_030430
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
  0.525
TSTA_058640
Cytochrome b5 reductase, putative.
    
  0.525
TSTA_090920
Malic enzyme.
     
 0.461
TSTA_006160
Malic enzyme.
     
 0.461
TSTA_074110
Hydrolase, putative.
     
 0.436
TSTA_063080
Epoxide hydrolase, putative.
     
 0.436
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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