STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_046790Methionyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family. (578 aa)    
Predicted Functional Partners:
TSTA_068250
Methionine-tRNA synthetase, putative.
    
 0.937
TSTA_112830
Leucyl-tRNA synthetase.
  
0.924
TSTA_005260
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.924
TSTA_030410
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.922
TSTA_059390
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
0.917
TSTA_011650
Cystathionine gamma-lyase.
   
 
 0.902
TSTA_118450
Cobalamin-independent methionine synthase MetH/D.
     
 0.898
TSTA_119270
Prolyl-tRNA synthetase.
  
 0.868
TSTA_074960
Prolyl-tRNA synthetase.
  
 0.865
TSTA_072220
Methionyl-tRNA formyltransferase family protein, putative.
     
 0.861
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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