STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_099140Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
TSTA_124140
Uncharacterized protein.
    
 0.792
TSTA_086310
Zinc finger protein, putative.
   
 0.752
TSTA_116990
Chromatin assembly factor 1 subunit C, putative.
    
 0.736
TSTA_094840
WD repeat protein.
    
 0.716
TSTA_104250
Histone-lysine N-methyltransferase (Bre2), putative.
    
 0.716
TSTA_088780
Jumonji family transcription factor, putative.
   
 0.714
TSTA_103820
Histone H2B; Belongs to the histone H2B family.
    
 0.671
TSTA_079110
Histone H2A; Belongs to the histone H2A family.
    
 0.663
TSTA_038750
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.656
TSTA_078380
Polyubiquitin UbiD/Ubi4, putative.
    
 0.648
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.