STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_104080DUF652 domain protein. (190 aa)    
Predicted Functional Partners:
TSTA_094950
U3 small nucleolar RNA-associated protein Utp11, putative.
   
 0.997
TSTA_102790
RNA processing protein Emg1, putative.
   
 0.997
TSTA_075570
Sas10/Utp3 family protein.
   
 0.996
TSTA_038640
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
TSTA_027740
Nucleolar protein nop5.
   
 0.996
TSTA_018220
Small nucleolar ribonucleoprotein complex subunit Utp14, putative.
   
 0.996
TSTA_057100
Ribosome biogenesis protein (Bms1), putative.
   
 0.996
TSTA_048750
Small nucleolar ribonucleoprotein complex subunit, putative.
   
 0.995
TSTA_103750
U3 small nucleolar RNA-associated protein 22.
   
 0.995
TSTA_090960
U3 small nucleolar ribonucleoprotein subunit (Imp3), putative.
   
 0.994
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.