STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_006710Cytochrome c oxidase assembly protein (Pet117), putative. (87 aa)    
Predicted Functional Partners:
TSTA_065310
Cytochrome c oxidase assembly protein cox15.
    
 
 0.578
TSTA_026300
mRNA binding protein Pumilio 2, putative.
    
   0.565
TSTA_026220
Uncharacterized protein.
   
  
 0.541
TSTA_049380
Cytochrome c oxidase assembly protein Cox11, putative.
    
 
 0.517
TSTA_073310
Uncharacterized protein.
   
  
 0.500
TSTA_045670
Pumilio-family RNA binding repeat domain protein.
    
   0.485
TSTA_101530
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.468
TSTA_013630
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
      
 0.461
TSTA_099730
Mitochondrial metallochaperone Sco1, putative.
      
 0.461
TSTA_112630
GTP binding protein (EngB), putative.
      
 0.424
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.