STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_110030WD repeat-containing protein, putative. (601 aa)    
Predicted Functional Partners:
TSTA_087000
U4/U6 small nuclear ribonucleoprotein, putative.
   
 0.867
TSTA_011050
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.791
TSTA_074470
Pre-mRNA splicing factor (Prp31), putative.
   
 0.737
TSTA_044670
Small nuclear ribonucleoprotein Sm D3.
   
  0.728
TSTA_011160
U5 snRNP component Snu114, putative.
   
 0.711
TSTA_033940
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.696
TSTA_070010
mRNA splicing factor (Prp1/Zer1), putative.
   
 0.693
TSTA_039020
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.688
TSTA_016690
Pre-mRNA splicing factor (Prp8), putative.
    
 0.687
TSTA_064110
Small nuclear ribonucleoprotein Sm D2.
   
 0.677
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.