Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSTA_002880 | get3 | B8MS91 | B8M4Y9 | Arsenate reductase (ArsC), putative. | ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] | 0.868 |
TSTA_005510 | TSTA_018890 | B8MSQ6 | B8MH09 | DUF410 domain protein. | Translocon protein Sec61beta, putative. | 0.598 |
TSTA_005510 | TSTA_071120 | B8MSQ6 | B8LUD6 | DUF410 domain protein. | Uncharacterized protein. | 0.560 |
TSTA_005510 | TSTA_074170 | B8MSQ6 | B8LUU3 | DUF410 domain protein. | Hsc70 cochaperone (SGT), putative. | 0.960 |
TSTA_005510 | TSTA_077640 | B8MSQ6 | B8LWK8 | DUF410 domain protein. | Uncharacterized protein. | 0.407 |
TSTA_005510 | TSTA_120220 | B8MSQ6 | B8MDP3 | DUF410 domain protein. | UV excision repair protein (RadW), putative. | 0.933 |
TSTA_005510 | get1 | B8MSQ6 | B8LUE3 | DUF410 domain protein. | Protein get1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble get3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. | 0.667 |
TSTA_005510 | get3 | B8MSQ6 | B8M4Y9 | DUF410 domain protein. | ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] | 0.990 |
TSTA_018890 | TSTA_005510 | B8MH09 | B8MSQ6 | Translocon protein Sec61beta, putative. | DUF410 domain protein. | 0.598 |
TSTA_018890 | TSTA_071120 | B8MH09 | B8LUD6 | Translocon protein Sec61beta, putative. | Uncharacterized protein. | 0.695 |
TSTA_018890 | TSTA_074170 | B8MH09 | B8LUU3 | Translocon protein Sec61beta, putative. | Hsc70 cochaperone (SGT), putative. | 0.911 |
TSTA_018890 | TSTA_120220 | B8MH09 | B8MDP3 | Translocon protein Sec61beta, putative. | UV excision repair protein (RadW), putative. | 0.641 |
TSTA_018890 | TSTA_123530 | B8MH09 | B8MAC0 | Translocon protein Sec61beta, putative. | ER-Golgi SNARE complex subunit (Sed5), putative. | 0.764 |
TSTA_018890 | get1 | B8MH09 | B8LUE3 | Translocon protein Sec61beta, putative. | Protein get1; Required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Acts as a membrane receptor for soluble get3, which recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. | 0.808 |
TSTA_018890 | get3 | B8MH09 | B8M4Y9 | Translocon protein Sec61beta, putative. | ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] | 0.861 |
TSTA_071120 | TSTA_005510 | B8LUD6 | B8MSQ6 | Uncharacterized protein. | DUF410 domain protein. | 0.560 |
TSTA_071120 | TSTA_018890 | B8LUD6 | B8MH09 | Uncharacterized protein. | Translocon protein Sec61beta, putative. | 0.695 |
TSTA_071120 | get3 | B8LUD6 | B8M4Y9 | Uncharacterized protein. | ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] | 0.964 |
TSTA_074170 | TSTA_005510 | B8LUU3 | B8MSQ6 | Hsc70 cochaperone (SGT), putative. | DUF410 domain protein. | 0.960 |
TSTA_074170 | TSTA_018890 | B8LUU3 | B8MH09 | Hsc70 cochaperone (SGT), putative. | Translocon protein Sec61beta, putative. | 0.911 |
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