STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_037270Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (586 aa)    
Predicted Functional Partners:
PMAA_025380
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 0.985
PMAA_039970
Vacuolar protein sorting-associated protein Vps5, putative.
    
0.940
PMAA_020500
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.937
PMAA_042040
Vacuolar protein sorting-associated protein 26, putative.
    
 0.896
PMAA_039870
Vacuolar targeting protein Atg24, putative.
    
 
 0.616
PMAA_002980
Sorting nexin Snx3, putative.
    
 
 0.597
vps10
Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family.
    
 0.579
PMAA_021260
BAR adaptor protein RVS167, putative.
  
 
 
 0.511
PMAA_022330
Autophagy protein Atg20, putative.
      
 0.452
PMAA_057650
Cell wall integrity signaling protein Lsp1/Pil1, putative.
  
 
 
 0.434
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.