STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_038140Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (567 aa)    
Predicted Functional Partners:
PMAA_067210
60S ribosomal protein L30, putative.
   
 0.945
PMAA_086460
60S ribosomal protein L23.
   
 0.943
PMAA_051030
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.939
PMAA_094430
60S ribosomal protein L38, putative; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.938
PMAA_077800
60S ribosomal protein L31e.
   
 0.931
PMAA_068040
60S ribosomal protein L5, putative.
   
 0.928
PMAA_018420
60S ribosomal protein L24a.
  
 0.922
PMAA_002730
60S ribosomal protein L21, putative.
   
 0.913
PMAA_038200
60S ribosomal protein L32.
   
 0.912
PMAA_013210
60S ribosomal protein L35Ae.
   
 0.911
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.