STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_030310Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (974 aa)    
Predicted Functional Partners:
PMAA_056360
Serine/threonine protein kinase (Pdd7p), putative.
   
 0.999
PMAA_022210
Kinase activator (Atg17), putative.
    
 0.998
PMAA_084810
Uncharacterized protein.
    
 0.997
PMAA_019190
Taz1-interacting factor 1 (TAF1), putative.
    
 0.986
PMAA_080080
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 0.964
PMAA_033860
Vacuolar armadillo repeat protein Vac8, putative.
    
 
 0.930
PMAA_047500
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.929
PMAA_044990
TORC1 growth control complex subunit Kog1, putative.
     
 0.923
PMAA_025250
Protein transport protein (LST8), putative.
     
 0.911
PMAA_035430
Serine/threonine-protein phosphatase.
    
 0.901
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.