STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_078120AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (185 aa)    
Predicted Functional Partners:
PMAA_069670
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.996
PMAA_032630
AP-3 adaptor complex subunit beta, putative.
    
 0.989
PMAA_024160
AP-1 complex subunit gamma.
    
 0.969
PMAA_080530
AP-3 adaptor complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.
   
 0.955
PMAA_035690
GPI anchored CFEM domain protein.
    
 0.878
PMAA_093760
CFEM domain protein, putative.
    
 0.878
PMAA_083240
AP-1 adaptor complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.
    
 0.877
PMAA_078130
Cytosolic large ribosomal subunit protein L7A.
 
    
 0.835
PMAA_021910
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
0.752
PMAA_092910
SNARE protein Snc2, putative.
     
 0.699
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.