STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_097360NUDIX family hydrolase, putative. (429 aa)    
Predicted Functional Partners:
PMAA_037860
Decapping enzyme Dcp1, putative.
    
 0.671
PMAA_038330
Peroxisome biosynthesis protein (PAS10/Peroxin-12), putative.
   
 
 0.655
PMAA_073380
Topisomerase II associated protein (Pat1), putative.
    
 0.628
PMAA_009510
Peroxisomal targeting signal-1 receptor (PEX5), putative.
     
 0.617
PMAA_020250
Peroxisomal membrane anchor protein (Pex14), putative.
     
 0.608
PMAA_058700
Peroxisomal membrane protein (Pex13), putative.
     
 0.605
PMAA_097230
Mitochondrial processing peptidase alpha subunit, putative; Belongs to the peptidase M16 family.
   
   0.583
PMAA_033990
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.540
PMAA_079610
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.540
PMAA_082290
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 0.532
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.