STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1000 aa)    
Predicted Functional Partners:
PMAA_080960
20S cyclosome subunit (Cut9/Cdc16), putative.
   
 0.919
PMAA_065820
Anaphase-promoting complex component Cut20/Apc4, putative.
   
 0.918
PMAA_004090
Anaphase-promoting complex subunit Apc5, putative.
   
 0.915
PMAA_004360
20S cyclosome subunit (APC1/BimE), putative.
    
 0.913
PMAA_029500
Anaphase-promoting complex subunit ApcB, putative; Belongs to the cullin family.
    
 0.911
PMAA_065910
Anaphase promoting complex subunit 10 (APC10), putative.
    
 0.911
PMAA_072540
Checkpoint protein kinase (SldA), putative.
    
 0.886
PMAA_059240
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.833
PMAA_014410
Mitotic spindle checkpoint protein (Mad2), putative.
    
 0.813
PMAA_064100
Ribosomal protein S13p/S18e; Belongs to the universal ribosomal protein uS13 family.
    
 0.804
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.