STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_043100ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family. (183 aa)    
Predicted Functional Partners:
PMAA_068240
Rho GTPase activator Rga, putative.
   
 0.931
PMAA_083350
UBA/TS-N domain protein.
   
 0.923
PMAA_045070
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.922
PMAA_024160
AP-1 complex subunit gamma.
    
 0.912
PMAA_021010
ADP-ribosylation factor 6, putative; Belongs to the small GTPase superfamily. Arf family.
  
0.908
PMAA_031110
Guanine nucleotide exchange factor (Gea2), putative.
    
 0.895
PMAA_037290
Zinc finger protein gcs1.
   
 0.885
PMAA_083240
AP-1 adaptor complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.
    
 0.870
PMAA_042670
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.858
PMAA_087180
ARF GTPase activator (Glo3), putative.
   
 0.853
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.