STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_002250Uncharacterized protein. (233 aa)    
Predicted Functional Partners:
PMAA_043450
BZIP transcription factor CpcA.
    
 0.619
PMAA_087250
Uncharacterized protein.
   
 
 0.459
PMAA_030250
Uncharacterized protein.
   
   0.451
PMAA_032400
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.451
PMAA_032520
30S ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.450
PMAA_027020
37S ribosomal protein S25, mitochondrial.
   
 
 0.442
PMAA_026120
40S ribosomal protein S2, putative.
   
 
 0.441
PMAA_073360
37S ribosomal protein S12.
   
 
 0.417
PMAA_025310
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.415
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.