STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMAA_00331040S ribosomal protein S27. (82 aa)    
Predicted Functional Partners:
PMAA_017670
Ribosomal protein L14.
   
 
 0.999
PMAA_018420
60S ribosomal protein L24a.
   
 
 0.999
rps0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.999
PMAA_019840
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.999
PMAA_023770
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
PMAA_024190
Ribosomal protein L16a; Belongs to the universal ribosomal protein uL13 family.
   
 0.999
PMAA_024830
40S ribosomal protein S3, putative; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
PMAA_025340
Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family.
   
 0.999
PMAA_016360
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
PMAA_026340
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.