STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sconBProbable E3 ubiquitin ligase complex SCF subunit sconB; Component of the SCF(sconB) E3 ubiquitin ligase complex involved in the regulation of sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor. (660 aa)    
Predicted Functional Partners:
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Essential component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Controls sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor (By similarity).
    
 0.993
PMAA_067950
SCF ubiquitin ligase complex subunit CulA, putative; Belongs to the cullin family.
    
 0.988
PMAA_086620
Ubiquitin ligase subunit HrtA, putative.
    
 0.962
PMAA_069980
Protein kinase, putative.
    
 0.914
PMAA_059860
Uncharacterized protein.
    
 0.899
PMAA_072710
SCF ubiquitin ligase subunit CulC, putative; Belongs to the cullin family.
    
 0.834
PMAA_027760
BZIP transcription factor (MetR), putative.
    
 
 0.747
PMAA_057640
BZIP transcription factor, putative.
    
 
 0.747
PMAA_070430
NEDD8-like protein (RubA), putative.
    
 0.653
PMAA_040320
Polyubiquitin UbiD/Ubi4, putative.
    
 0.638
Your Current Organism:
Talaromyces marneffei
NCBI taxonomy Id: 441960
Other names: Penicillium marneffei ATCC 18224, T. marneffei ATCC 18224, Talaromyces marneffei ATCC 18224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.