STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH18582.1Phosphonate transport system ATP-binding protein. (223 aa)    
Predicted Functional Partners:
SFH18555.1
Phosphonate transport system substrate-binding protein.
 
 
 0.999
SFH18609.1
Phosphonate transport system permease protein.
 
 0.997
SFH87867.1
Phosphonate transport system substrate-binding protein.
 
 
 0.991
SFH87829.1
Phosphonate transport system permease protein.
 
 
 0.980
SFH87809.1
Phosphonate transport system permease protein.
 
 0.966
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 
0.934
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 
0.632
SFI04197.1
Putative ABC transport system ATP-binding protein.
  
  
 
0.631
SFH39761.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
   
 
 0.619
SFI11485.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
   
 
 0.619
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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