STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH32303.1Muconolactone delta-isomerase. (96 aa)    
Predicted Functional Partners:
SFH32323.1
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.999
SFH32282.1
Catechol 1,2-dioxygenase.
 
  
 0.989
SFH32231.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
  
 0.947
SFH32249.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
  
 0.942
SFH29240.1
Hydroxyquinol 1,2-dioxygenase.
 
  
 0.941
SFH32264.1
Benzoate/toluate 1,2-dioxygenase alpha subunit.
 
  
 0.916
SFI18209.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.903
SFH32211.1
Dihydroxycyclohexadiene carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.848
SFH32336.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.811
SFH32191.1
MFS transporter, AAHS family, benzoate transport protein.
 
   
 0.770
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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