STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH39306.1Potassium efflux system protein. (1111 aa)    
Predicted Functional Partners:
SFH39291.1
Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
       0.635
SFI11776.1
TIGR01666 family membrane protein.
  
     0.563
SFH81353.1
Uncharacterized conserved protein YtfP, gamma-glutamylcyclotransferase (GGCT)/AIG2-like family.
 
     0.547
SFI02959.1
LexA-binding, inner membrane-associated putative hydrolase.
 
    0.527
SFH73130.1
Translocation and assembly module TamB.
 
     0.516
SFH37523.1
Hemerythrin-like domain-containing protein.
  
     0.515
SFI14935.1
Conserved hypothetical protein.
 
     0.506
SFH27647.1
Cell Wall Hydrolase.
  
     0.489
SFH19020.1
Nucleoid-associated protein.
  
     0.481
SFI01075.1
Putative membrane protein.
  
     0.450
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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