STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH35468.1Capsular polysaccharide synthesis protein. (230 aa)    
Predicted Functional Partners:
SFH35509.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
       0.795
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
       0.783
SFH35442.1
Sulfotransferase domain-containing protein.
       0.773
SFH35487.1
Hypothetical protein.
       0.773
SFH35554.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
    0.760
SFH35603.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.675
SFH35579.1
VanZ like family protein.
       0.664
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
       0.642
SFH35421.1
Di-and tricarboxylate transporter.
       0.620
SFH35668.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.609
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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