STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH43827.1Xanthine dehydrogenase accessory factor. (287 aa)    
Predicted Functional Partners:
SFH43804.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.999
SFH43786.1
Xanthine dehydrogenase small subunit.
 
 
 0.997
SFH43847.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
  0.995
SFH54217.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 
 0.936
SFH54197.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 
 
 0.871
SFH54234.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 
 0.870
SFH59414.1
Uncharacterized membrane protein.
 
  
  0.857
SFH43769.1
Transcriptional regulator, TetR family.
 
     0.848
SFH55545.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 
 0.833
SFI22196.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.830
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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