STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH44043.1cation:H+ antiporter. (323 aa)    
Predicted Functional Partners:
SFH44064.1
Paraquat-inducible protein A.
       0.585
SFH44083.1
Paraquat-inducible protein B.
       0.585
SFH67123.1
Arabinose-5-phosphate isomerase.
    
 0.567
SFH44021.1
cation:H+ antiporter.
 
    
0.540
SFH44106.1
Hypothetical protein.
       0.501
SFH67107.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase); Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
    
 0.446
SFH43935.1
ATP-binding cassette, subfamily C, CydC.
       0.432
SFH43955.1
ATP-binding cassette, subfamily C, CydD.
       0.432
SFH43981.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
       0.432
SFH44001.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
       0.432
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.