STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH51032.1Rieske 2Fe-2S family protein. (428 aa)    
Predicted Functional Partners:
SFH51016.1
Ferredoxin-NADP reductase.
 
 0.997
SFH32249.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 0.996
SFH92990.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 
 0.966
SFH51161.1
2,4-dienoyl-CoA reductase.
 
 
 0.964
SFH51174.1
Hypothetical protein.
 
    0.956
SFH93009.1
Sarcosine oxidase subunit delta.
 
    0.951
SFH51118.1
Electron transfer flavoprotein beta subunit.
 
    0.947
SFH92973.1
Sarcosine oxidase subunit gamma.
 
    0.946
SFH51146.1
Fe-S oxidoreductase.
 
  
 0.935
SFH31873.1
Vanillate O-demethylase ferredoxin subunit.
 
 
 0.883
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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