STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH59414.1Uncharacterized membrane protein. (410 aa)    
Predicted Functional Partners:
SFH59399.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.957
SFH59385.1
OHCU decarboxylase.
 
    0.937
SFH59513.1
Ureidoglycolate lyase.
 
    0.864
SFH43827.1
Xanthine dehydrogenase accessory factor.
 
  
  0.857
SFH59485.1
Putative urate catabolism protein.
 
    0.817
SFH43804.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.788
SFH59427.1
DNA-binding transcriptional regulator, GntR family.
 
     0.780
SFH43847.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.776
SFH43786.1
Xanthine dehydrogenase small subunit.
 
     0.753
SFH78116.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
    
  0.678
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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