STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH59485.1Putative urate catabolism protein. (311 aa)    
Predicted Functional Partners:
SFH59385.1
OHCU decarboxylase.
 
  0.998
SFH59471.1
Allantoin racemase.
 
  
  0.981
SFH59399.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.948
SFH31114.1
N-carbamoyl-L-amino-acid hydrolase.
 
  
 0.944
SFH59414.1
Uncharacterized membrane protein.
 
    0.817
SFH59513.1
Ureidoglycolate lyase.
 
     0.809
SFH59500.1
(S)-ureidoglycine aminohydrolase.
       0.794
SFI03339.1
4-amino-4-deoxy-L-arabinose transferase.
  
 
 0.773
SFH43847.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.740
SFH18410.1
Transferase 2, rSAM/selenodomain-associated.
  
 
 0.668
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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