STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH60004.1ferredoxin--NADP+ reductase. (258 aa)    
Predicted Functional Partners:
SFH51161.1
2,4-dienoyl-CoA reductase.
  
 
 0.741
SFH20686.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.730
SFH59990.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.690
SFH78134.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
  0.628
SFI17957.1
Vanillin synthase /trans-feruloyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.622
SFH91339.1
2,4-dienoyl-CoA reductase (NADPH2).
    
 0.604
SFH20972.1
Probable FeS assembly SUF system protein SufT.
  
 
 0.578
SFH32264.1
Benzoate/toluate 1,2-dioxygenase alpha subunit.
  
 
 0.546
SFH32249.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
    
 0.528
SFH17773.1
Nitrite reductase (NADH) small subunit.
   
 
  0.527
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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