Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH58814.1 | SFH58851.1 | SAMN04487959_10664 | SAMN04487959_10666 | Heptosyltransferase-2. | Glycosyltransferase involved in cell wall bisynthesis. | 0.449 |
SFH58814.1 | SFH58868.1 | SAMN04487959_10664 | SAMN04487959_10667 | Heptosyltransferase-2. | Glycosyltransferase involved in cell wall bisynthesis. | 0.765 |
SFH58814.1 | SFH58907.1 | SAMN04487959_10664 | SAMN04487959_10670 | Heptosyltransferase-2. | Heptosyltransferase I. | 0.674 |
SFH58814.1 | SFH58936.1 | SAMN04487959_10664 | SAMN04487959_10672 | Heptosyltransferase-2. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.954 |
SFH58814.1 | SFH58948.1 | SAMN04487959_10664 | SAMN04487959_10673 | Heptosyltransferase-2. | Glycosyl transferase family 90. | 0.423 |
SFH58814.1 | SFH70473.1 | SAMN04487959_10664 | SAMN04487959_10847 | Heptosyltransferase-2. | UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase. | 0.884 |
SFH58814.1 | kdkA | SAMN04487959_10664 | SAMN04487959_10669 | Heptosyltransferase-2. | 3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.912 |
SFH58814.1 | lpxK | SAMN04487959_10664 | SAMN04487959_107152 | Heptosyltransferase-2. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.666 |
SFH58833.1 | SFH58851.1 | SAMN04487959_10665 | SAMN04487959_10666 | Phosphoglycerol transferase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.694 |
SFH58833.1 | SFH58868.1 | SAMN04487959_10665 | SAMN04487959_10667 | Phosphoglycerol transferase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.763 |
SFH58833.1 | SFH58884.1 | SAMN04487959_10665 | SAMN04487959_10668 | Phosphoglycerol transferase. | Hypothetical protein. | 0.469 |
SFH58833.1 | SFH58907.1 | SAMN04487959_10665 | SAMN04487959_10670 | Phosphoglycerol transferase. | Heptosyltransferase I. | 0.444 |
SFH58833.1 | SFH58936.1 | SAMN04487959_10665 | SAMN04487959_10672 | Phosphoglycerol transferase. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.404 |
SFH58833.1 | SFH58948.1 | SAMN04487959_10665 | SAMN04487959_10673 | Phosphoglycerol transferase. | Glycosyl transferase family 90. | 0.632 |
SFH58833.1 | kdkA | SAMN04487959_10665 | SAMN04487959_10669 | Phosphoglycerol transferase. | 3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.512 |
SFH58851.1 | SFH58814.1 | SAMN04487959_10666 | SAMN04487959_10664 | Glycosyltransferase involved in cell wall bisynthesis. | Heptosyltransferase-2. | 0.449 |
SFH58851.1 | SFH58833.1 | SAMN04487959_10666 | SAMN04487959_10665 | Glycosyltransferase involved in cell wall bisynthesis. | Phosphoglycerol transferase. | 0.694 |
SFH58851.1 | SFH58868.1 | SAMN04487959_10666 | SAMN04487959_10667 | Glycosyltransferase involved in cell wall bisynthesis. | Glycosyltransferase involved in cell wall bisynthesis. | 0.928 |
SFH58851.1 | SFH58884.1 | SAMN04487959_10666 | SAMN04487959_10668 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.797 |
SFH58851.1 | SFH58907.1 | SAMN04487959_10666 | SAMN04487959_10670 | Glycosyltransferase involved in cell wall bisynthesis. | Heptosyltransferase I. | 0.734 |
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