Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFH26923.1 | lolB | SAMN04487959_10226 | SAMN04487959_107164 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.759 |
| SFH26923.1 | minE | SAMN04487959_10226 | SAMN04487959_113119 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.838 |
| SFH26923.1 | parC | SAMN04487959_10226 | SAMN04487959_101287 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. | 0.846 |
| SFH58225.1 | lolA | SAMN04487959_10629 | SAMN04487959_103138 | Outer membrane protein OmpA. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.795 |
| SFH58225.1 | lolB | SAMN04487959_10629 | SAMN04487959_107164 | Outer membrane protein OmpA. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.780 |
| SFH66382.1 | ispE | SAMN04487959_107165 | SAMN04487959_107163 | Tetratricopeptide repeat-containing protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.820 |
| SFH66382.1 | lolB | SAMN04487959_107165 | SAMN04487959_107164 | Tetratricopeptide repeat-containing protein. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.823 |
| SFI13349.1 | lolA | SAMN04487959_12032 | SAMN04487959_103138 | OmpA family protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.795 |
| SFI13349.1 | lolB | SAMN04487959_12032 | SAMN04487959_107164 | OmpA family protein. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.780 |
| SFI17355.1 | lolA | SAMN04487959_12413 | SAMN04487959_103138 | OmpA-OmpF porin, OOP family. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.829 |
| SFI17355.1 | lolB | SAMN04487959_12413 | SAMN04487959_107164 | OmpA-OmpF porin, OOP family. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.780 |
| ispE | SFH66382.1 | SAMN04487959_107163 | SAMN04487959_107165 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Tetratricopeptide repeat-containing protein. | 0.820 |
| ispE | lolB | SAMN04487959_107163 | SAMN04487959_107164 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.889 |
| lolA | SFH58225.1 | SAMN04487959_103138 | SAMN04487959_10629 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein OmpA. | 0.795 |
| lolA | SFI13349.1 | SAMN04487959_103138 | SAMN04487959_12032 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | OmpA family protein. | 0.795 |
| lolA | SFI17355.1 | SAMN04487959_103138 | SAMN04487959_12413 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | OmpA-OmpF porin, OOP family. | 0.829 |
| lolA | lolB | SAMN04487959_103138 | SAMN04487959_107164 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.747 |
| lolA | pal | SAMN04487959_103138 | SAMN04487959_108194 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.860 |
| lolB | SFH26923.1 | SAMN04487959_107164 | SAMN04487959_10226 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.759 |
| lolB | SFH58225.1 | SAMN04487959_107164 | SAMN04487959_10629 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Outer membrane protein OmpA. | 0.780 |
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