Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH18485.1 | SFH20686.1 | SAMN04487959_101136 | SAMN04487959_101231 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.965 |
SFH18485.1 | SFH53233.1 | SAMN04487959_101136 | SAMN04487959_105131 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADPH/NADH) small chain. | 0.984 |
SFH18485.1 | SFH53251.1 | SAMN04487959_101136 | SAMN04487959_105132 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADPH) large subunit. | 0.999 |
SFH18485.1 | SFH66561.1 | SAMN04487959_101136 | SAMN04487959_107176 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.925 |
SFH18485.1 | SFH66649.1 | SAMN04487959_101136 | SAMN04487959_107181 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.928 |
SFH18485.1 | SFI03903.1 | SAMN04487959_101136 | SAMN04487959_11560 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | L-glutamine synthetase. | 0.928 |
SFH18485.1 | glsA | SAMN04487959_101136 | SAMN04487959_10876 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | L-glutaminase; Belongs to the glutaminase family. | 0.929 |
SFH18485.1 | proA | SAMN04487959_101136 | SAMN04487959_10783 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.931 |
SFH18485.1 | proB | SAMN04487959_101136 | SAMN04487959_11828 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.730 |
SFH20686.1 | SFH18485.1 | SAMN04487959_101231 | SAMN04487959_101136 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.965 |
SFH20686.1 | SFH53233.1 | SAMN04487959_101231 | SAMN04487959_105131 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) small chain. | 0.944 |
SFH20686.1 | SFH53251.1 | SAMN04487959_101231 | SAMN04487959_105132 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH) large subunit. | 0.950 |
SFH20686.1 | SFH66561.1 | SAMN04487959_101231 | SAMN04487959_107176 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamine synthetase. | 0.948 |
SFH20686.1 | SFH66649.1 | SAMN04487959_101231 | SAMN04487959_107181 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamine synthetase. | 0.948 |
SFH20686.1 | SFI03903.1 | SAMN04487959_101231 | SAMN04487959_11560 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | L-glutamine synthetase. | 0.948 |
SFH20686.1 | glsA | SAMN04487959_101231 | SAMN04487959_10876 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | L-glutaminase; Belongs to the glutaminase family. | 0.926 |
SFH20686.1 | proA | SAMN04487959_101231 | SAMN04487959_10783 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.952 |
SFH20686.1 | proB | SAMN04487959_101231 | SAMN04487959_11828 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.954 |
SFH53233.1 | SFH18485.1 | SAMN04487959_105131 | SAMN04487959_101136 | Glutamate synthase (NADPH/NADH) small chain. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.984 |
SFH53233.1 | SFH20686.1 | SAMN04487959_105131 | SAMN04487959_101231 | Glutamate synthase (NADPH/NADH) small chain. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.944 |
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