STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH77432.1Glycosyltransferase like family 2. (220 aa)    
Predicted Functional Partners:
SFH77406.1
Nodulation protein S (NodS).
     0.983
SFH35442.1
Sulfotransferase domain-containing protein.
  
 0.960
SFH77383.1
N-acetylglucosaminyl deacetylase, LmbE family.
     0.959
SFH77366.1
Acyl-CoA dehydrogenase.
 
     0.935
SFH94546.1
Biofilm PGA synthesis lipoprotein PgaB.
 
 
 0.726
SFI10545.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.706
SFH59485.1
Putative urate catabolism protein.
  
 
 0.668
SFI03933.1
Polysaccharide deacetylase.
  
 
 0.668
SFI16192.1
Creatinine amidohydrolase.
  
  
 0.665
SFH47323.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.648
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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