STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH86146.1NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. (463 aa)    
Predicted Functional Partners:
SFH86185.1
Glycine/D-amino acid oxidase.
 0.999
SFH93009.1
Sarcosine oxidase subunit delta.
 
 0.982
SFH86156.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 
 0.978
SFH93028.1
Sarcosine oxidase subunit beta.
 0.977
SFH92973.1
Sarcosine oxidase subunit gamma.
 
 0.975
SFI10048.1
Glycine oxidase.
 
 0.958
SFH52058.1
D-amino-acid dehydrogenase.
 
 0.956
SFH19758.1
Hypothetical protein.
  
 0.948
SFH31873.1
Vanillate O-demethylase ferredoxin subunit.
  
 0.946
SFH32231.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 0.946
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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