STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI11467.1acyl-CoA thioesterase YciA. (134 aa)    
Predicted Functional Partners:
SFH76552.1
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.926
SFI11485.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
       0.747
SFH37964.1
Thioesterase domain-containing protein, putative.
     
 0.700
SFH60169.1
Uncharacterized domain 1-containing protein.
     
 0.700
SFH47267.1
HopJ type III effector protein.
 
      0.658
SFH29137.1
Uncharacterized conserved protein, DUF849 family.
    
  0.649
SFH52436.1
Intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
      0.610
SFH51130.1
Electron transfer flavoprotein alpha subunit apoprotein.
    
  0.573
SFH78878.1
Electron transfer flavoprotein alpha subunit apoprotein.
    
  0.573
SFH46024.1
Enoyl-CoA hydratase/carnithine racemase.
   
 0.565
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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