STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI14704.1Uncharacterized iron-regulated membrane protein. (447 aa)    
Predicted Functional Partners:
SFH19758.1
Hypothetical protein.
    
  0.707
SFI14725.1
Protein of unknown function.
  
    0.704
SFH81572.1
Iron complex outermembrane recepter protein.
 
  
 0.607
SFH21806.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
  
 0.526
SFI14665.1
ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.518
SFI14685.1
ABC-type uncharacterized transport system, substrate-binding protein.
       0.518
SFH52139.1
Iron complex outermembrane recepter protein.
 
  
 0.515
SFH81817.1
Iron complex outermembrane recepter protein.
 
  
 0.498
SFH43476.1
Hypothetical protein.
  
    0.487
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.482
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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