STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI15408.1Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily. (848 aa)    
Predicted Functional Partners:
SFI15424.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.981
SFI15392.1
Uncharacterized conserved protein, DUF2126 family.
  
 0.975
SFH65437.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.913
SFI15360.1
Uncharacterized conserved protein, Alpha-E superfamily.
 
   
0.905
SFI15373.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
   
0.895
SFH53251.1
Glutamate synthase (NADPH) large subunit.
    
  0.876
SFH86281.1
Hypothetical protein.
  
    0.779
SFH72769.1
Inactive transglutaminase fused to 7 transmembrane helices.
  
  
 0.645
SFH65748.1
Bifunctional non-homologous end joining protein LigD.
  
    0.544
SFH66148.1
Competence protein ComEC.
       0.530
Your Current Organism:
Halomonas xianhensis
NCBI taxonomy Id: 442341
Other names: CGMCC 1.6848, H. xianhensis, Halomonas sp. A-1, Halomonas xianhensis Zhao et al. 2012, JCM 14849, strain A-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.