Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ10990.1Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
AIQ10987.1
Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
AIQ10984.1
Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.951
AIQ10991.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.926
AIQ10986.1
Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
AIQ13488.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.890
AIQ10682.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.821
AIQ13490.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.786
AIQ13489.1
Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.781
AIQ13519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
AIQ13923.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
Your Current Organism:
Paenibacillus durus
NCBI taxonomy Id: 44251
Other names: ATCC 27763, ATCC 35681 [[Paenibacillus azotofixans]], Bacillus azotifixans, Bacillus azotofixans, CIP 104586 [[Paenibacillus azotofixans]], Clostridium durum, DSM 5976 [[Paenibacillus azotofixans]], LMG 14658 [[Paenibacillus azotofixans]], LMG:14658 [[Paenibacillus azotofixans]], P. durus, Paenibacillus azotofixans, Paenibacillus durum, VPI 6563, bacterium ISSDS-862, strain P3L-5 [[Paenibacillus azotofixans]]
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