STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ11889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
AIQ12926.1
3-hydroxy-3-methylglutaryl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.811
AIQ11890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
AIQ11888.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
AIQ13386.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.698
AIQ12932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.667
AIQ12433.1
Phenylalanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
AIQ12431.1
Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.607
AIQ12432.1
Ornithine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.597
AIQ12044.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.596
AIQ12210.1
Squalene-hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.581
Your Current Organism:
Paenibacillus durus
NCBI taxonomy Id: 44251
Other names: ATCC 27763, ATCC 35681 [[Paenibacillus azotofixans]], Bacillus azotifixans, Bacillus azotofixans, CIP 104586 [[Paenibacillus azotofixans]], Clostridium durum, DSM 5976 [[Paenibacillus azotofixans]], LMG 14658 [[Paenibacillus azotofixans]], LMG:14658 [[Paenibacillus azotofixans]], P. durus, Paenibacillus azotofixans, Paenibacillus durum, VPI 6563, bacterium ISSDS-862, strain P3L-5 [[Paenibacillus azotofixans]]
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.