STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ12892.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
AIQ12891.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.969
AIQ12890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.961
AIQ12889.1
RNA polymerase sigma24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.880
AIQ15060.1
Glutathionylspermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
AIQ13125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
AIQ14996.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
AIQ12735.1
Amylopullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
AIQ13859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.526
AIQ13051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
AIQ14832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
Your Current Organism:
Paenibacillus durus
NCBI taxonomy Id: 44251
Other names: ATCC 27763, ATCC 35681 [[Paenibacillus azotofixans]], Bacillus azotifixans, Bacillus azotofixans, CIP 104586 [[Paenibacillus azotofixans]], Clostridium durum, DSM 5976 [[Paenibacillus azotofixans]], LMG 14658 [[Paenibacillus azotofixans]], LMG:14658 [[Paenibacillus azotofixans]], P. durus, Paenibacillus azotofixans, Paenibacillus durum, VPI 6563, bacterium ISSDS-862, strain P3L-5 [[Paenibacillus azotofixans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.