Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ13242.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
AIQ13240.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.882
AIQ13239.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.878
AIQ14520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.826
AIQ12776.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.821
AIQ13001.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.815
AIQ12507.1
Nitrogenase associated protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.811
AIQ12515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.809
AIQ12508.1
Nitrogenase associated protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.803
AIQ12775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.800
AIQ12516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.799
Your Current Organism:
Paenibacillus durus
NCBI taxonomy Id: 44251
Other names: ATCC 27763, ATCC 35681 [[Paenibacillus azotofixans]], Bacillus azotifixans, Bacillus azotofixans, CIP 104586 [[Paenibacillus azotofixans]], Clostridium durum, DSM 5976 [[Paenibacillus azotofixans]], LMG 14658 [[Paenibacillus azotofixans]], LMG:14658 [[Paenibacillus azotofixans]], P. durus, Paenibacillus azotofixans, Paenibacillus durum, VPI 6563, bacterium ISSDS-862, strain P3L-5 [[Paenibacillus azotofixans]]
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