Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_137 | DJ90_138 | DJ90_137 | DJ90_138 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.888 |
DJ90_137 | DJ90_139 | DJ90_137 | DJ90_139 | Helix-turn-helix domain protein. | Periplasmic binding s and sugar binding domain of LacI family protein. | 0.715 |
DJ90_138 | DJ90_137 | DJ90_138 | DJ90_137 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.888 |
DJ90_138 | DJ90_139 | DJ90_138 | DJ90_139 | HAMP domain protein. | Periplasmic binding s and sugar binding domain of LacI family protein. | 0.798 |
DJ90_138 | DJ90_2497 | DJ90_138 | DJ90_2497 | HAMP domain protein. | Response regulator. | 0.843 |
DJ90_138 | DJ90_3170 | DJ90_138 | DJ90_3170 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.705 |
DJ90_138 | DJ90_3286 | DJ90_138 | DJ90_3286 | HAMP domain protein. | Response regulator. | 0.732 |
DJ90_138 | DJ90_3705 | DJ90_138 | DJ90_3705 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.770 |
DJ90_138 | DJ90_4733 | DJ90_138 | DJ90_4733 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.727 |
DJ90_138 | DJ90_506 | DJ90_138 | DJ90_506 | HAMP domain protein. | Response regulator. | 0.893 |
DJ90_138 | DJ90_5851 | DJ90_138 | DJ90_5851 | HAMP domain protein. | Response regulator. | 0.738 |
DJ90_138 | ypdB | DJ90_138 | DJ90_5961 | HAMP domain protein. | Response regulator. | 0.887 |
DJ90_139 | DJ90_137 | DJ90_139 | DJ90_137 | Periplasmic binding s and sugar binding domain of LacI family protein. | Helix-turn-helix domain protein. | 0.715 |
DJ90_139 | DJ90_138 | DJ90_139 | DJ90_138 | Periplasmic binding s and sugar binding domain of LacI family protein. | HAMP domain protein. | 0.798 |
DJ90_2497 | DJ90_138 | DJ90_2497 | DJ90_138 | Response regulator. | HAMP domain protein. | 0.843 |
DJ90_2497 | DJ90_506 | DJ90_2497 | DJ90_506 | Response regulator. | Response regulator. | 0.429 |
DJ90_2497 | DJ90_5851 | DJ90_2497 | DJ90_5851 | Response regulator. | Response regulator. | 0.696 |
DJ90_3170 | DJ90_138 | DJ90_3170 | DJ90_138 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.705 |
DJ90_3286 | DJ90_138 | DJ90_3286 | DJ90_138 | Response regulator. | HAMP domain protein. | 0.732 |
DJ90_3705 | DJ90_138 | DJ90_3705 | DJ90_138 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.770 |
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