Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_1431 | DJ90_204 | Transposase zinc-ribbon domain protein. | GGDEF: diguanylate cyclase domain protein. | 0.418 |
DJ90_1431 | DJ90_4550 | Transposase zinc-ribbon domain protein. | Methyl-accepting chemotaxis (MCP) signaling domain protein. | 0.409 |
DJ90_1431 | DJ90_4678 | Transposase zinc-ribbon domain protein. | Hypothetical protein. | 0.807 |
DJ90_1431 | DJ90_4776 | Transposase zinc-ribbon domain protein. | GGDEF: diguanylate cyclase domain protein. | 0.418 |
DJ90_1431 | DJ90_478 | Transposase zinc-ribbon domain protein. | GAF domain protein. | 0.516 |
DJ90_1431 | DJ90_5527 | Transposase zinc-ribbon domain protein. | Helix-turn-helix domain protein. | 0.509 |
DJ90_1431 | DJ90_5964 | Transposase zinc-ribbon domain protein. | V4R domain protein. | 0.400 |
DJ90_1431 | DJ90_61 | Transposase zinc-ribbon domain protein. | His Kinase A domain protein. | 0.679 |
DJ90_1431 | DJ90_894 | Transposase zinc-ribbon domain protein. | Histidine kinase family protein. | 0.506 |
DJ90_204 | DJ90_1431 | GGDEF: diguanylate cyclase domain protein. | Transposase zinc-ribbon domain protein. | 0.418 |
DJ90_204 | DJ90_4550 | GGDEF: diguanylate cyclase domain protein. | Methyl-accepting chemotaxis (MCP) signaling domain protein. | 0.859 |
DJ90_204 | DJ90_4678 | GGDEF: diguanylate cyclase domain protein. | Hypothetical protein. | 0.996 |
DJ90_204 | DJ90_4776 | GGDEF: diguanylate cyclase domain protein. | GGDEF: diguanylate cyclase domain protein. | 0.805 |
DJ90_204 | DJ90_478 | GGDEF: diguanylate cyclase domain protein. | GAF domain protein. | 0.890 |
DJ90_204 | DJ90_5527 | GGDEF: diguanylate cyclase domain protein. | Helix-turn-helix domain protein. | 0.735 |
DJ90_204 | DJ90_61 | GGDEF: diguanylate cyclase domain protein. | His Kinase A domain protein. | 0.938 |
DJ90_4550 | DJ90_1431 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | Transposase zinc-ribbon domain protein. | 0.409 |
DJ90_4550 | DJ90_204 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | GGDEF: diguanylate cyclase domain protein. | 0.859 |
DJ90_4550 | DJ90_4678 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | Hypothetical protein. | 0.985 |
DJ90_4550 | DJ90_4776 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | GGDEF: diguanylate cyclase domain protein. | 0.891 |
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