Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_1521 | DJ90_1522 | DJ90_1521 | DJ90_1522 | Hypothetical protein. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.403 |
DJ90_1522 | DJ90_1521 | DJ90_1522 | DJ90_1521 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.403 |
DJ90_1522 | DJ90_766 | DJ90_1522 | DJ90_766 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Bacterial regulatory s, luxR family protein; Belongs to the LysR transcriptional regulatory family. | 0.771 |
DJ90_1522 | bsdC | DJ90_1522 | DJ90_1523 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Phenolic acid decarboxylase subunit C; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.526 |
DJ90_1522 | bsdD | DJ90_1522 | DJ90_1524 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Phenolic acid decarboxylase subunit D. | 0.444 |
DJ90_1522 | ilvE | DJ90_1522 | DJ90_5515 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | ilvE_II: branched-chain amino acid aminotransferase. | 0.517 |
DJ90_766 | DJ90_1522 | DJ90_766 | DJ90_1522 | Bacterial regulatory s, luxR family protein; Belongs to the LysR transcriptional regulatory family. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.771 |
bsdC | DJ90_1522 | DJ90_1523 | DJ90_1522 | Phenolic acid decarboxylase subunit C; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.526 |
bsdC | bsdD | DJ90_1523 | DJ90_1524 | Phenolic acid decarboxylase subunit C; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | Phenolic acid decarboxylase subunit D. | 0.987 |
bsdD | DJ90_1522 | DJ90_1524 | DJ90_1522 | Phenolic acid decarboxylase subunit D. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.444 |
bsdD | bsdC | DJ90_1524 | DJ90_1523 | Phenolic acid decarboxylase subunit D. | Phenolic acid decarboxylase subunit C; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. | 0.987 |
ilvE | DJ90_1522 | DJ90_5515 | DJ90_1522 | ilvE_II: branched-chain amino acid aminotransferase. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.517 |