Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_1756 | DJ90_1784 | DJ90_1756 | DJ90_1784 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.491 |
DJ90_1756 | DJ90_3628 | DJ90_1756 | DJ90_3628 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.485 |
DJ90_1756 | DJ90_5376 | DJ90_1756 | DJ90_5376 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.577 |
DJ90_1756 | gltB | DJ90_1756 | DJ90_4517 | Helix-turn-helix domain protein. | Ferredoxin-dependent glutamate synthase 1. | 0.570 |
DJ90_1782 | DJ90_1783 | DJ90_1782 | DJ90_1783 | Isochorismatase family protein. | Sugar (and other) transporter family protein. | 0.754 |
DJ90_1782 | DJ90_1784 | DJ90_1782 | DJ90_1784 | Isochorismatase family protein. | Helix-turn-helix domain protein. | 0.512 |
DJ90_1783 | DJ90_1782 | DJ90_1783 | DJ90_1782 | Sugar (and other) transporter family protein. | Isochorismatase family protein. | 0.754 |
DJ90_1783 | DJ90_1784 | DJ90_1783 | DJ90_1784 | Sugar (and other) transporter family protein. | Helix-turn-helix domain protein. | 0.537 |
DJ90_1784 | DJ90_1756 | DJ90_1784 | DJ90_1756 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.491 |
DJ90_1784 | DJ90_1782 | DJ90_1784 | DJ90_1782 | Helix-turn-helix domain protein. | Isochorismatase family protein. | 0.512 |
DJ90_1784 | DJ90_1783 | DJ90_1784 | DJ90_1783 | Helix-turn-helix domain protein. | Sugar (and other) transporter family protein. | 0.537 |
DJ90_1784 | DJ90_1785 | DJ90_1784 | DJ90_1785 | Helix-turn-helix domain protein. | Glycosyl hydrolase 81 family protein. | 0.553 |
DJ90_1784 | DJ90_1929 | DJ90_1784 | DJ90_1929 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.663 |
DJ90_1784 | DJ90_3392 | DJ90_1784 | DJ90_3392 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.604 |
DJ90_1784 | DJ90_3628 | DJ90_1784 | DJ90_3628 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.749 |
DJ90_1784 | DJ90_4036 | DJ90_1784 | DJ90_4036 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.553 |
DJ90_1784 | DJ90_5376 | DJ90_1784 | DJ90_5376 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.763 |
DJ90_1784 | gltB | DJ90_1784 | DJ90_4517 | Helix-turn-helix domain protein. | Ferredoxin-dependent glutamate synthase 1. | 0.570 |
DJ90_1785 | DJ90_1784 | DJ90_1785 | DJ90_1784 | Glycosyl hydrolase 81 family protein. | Helix-turn-helix domain protein. | 0.553 |
DJ90_1929 | DJ90_1784 | DJ90_1929 | DJ90_1784 | Helix-turn-helix domain protein. | Helix-turn-helix domain protein. | 0.663 |
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