STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_191O-Glycosyl hydrolase 30 family protein; Belongs to the glycosyl hydrolase 30 family. (480 aa)    
Predicted Functional Partners:
DJ90_5908
Glycosyl hydrolase 59 family protein; Belongs to the glycosyl hydrolase 30 family.
  
  
 
0.892
DJ90_1024
Glycosyl hydrolases 2 family protein; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.887
DJ90_2490
Glycosyl hydrolases 2 family protein.
    
  0.858
yesZ
Beta-galactosidase yesZ.
  
 0.789
iolB
5-deoxy-glucuronate isomerase; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate).
   
    0.668
DJ90_5075
Hypothetical protein.
 
     0.649
DJ90_3273
Bacterial extracellular solute-binding family protein.
 
     0.571
DJ90_193
Hypothetical protein; Glycosyl hydrolase family 3 C-terminal domain protein; Belongs to the glycosyl hydrolase 3 family.
 
     0.558
DJ90_3945
Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.542
xynD
Arabinoxylan arabinofuranohydrolase.
 
 0.517
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
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