Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_2086 | DJ90_2087 | DJ90_2086 | DJ90_2087 | Hypothetical protein. | coA-ligase family protein. | 0.973 |
DJ90_2086 | DJ90_2088 | DJ90_2086 | DJ90_2088 | Hypothetical protein. | Alpha/beta hydrolase fold family protein. | 0.861 |
DJ90_2086 | DJ90_2092 | DJ90_2086 | DJ90_2092 | Hypothetical protein. | Putative allantoin permease. | 0.724 |
DJ90_2086 | DJ90_2095 | DJ90_2086 | DJ90_2095 | Hypothetical protein. | Hypothetical protein; pucR C-terminal helix-turn-helix domain protein. | 0.765 |
DJ90_2086 | DJ90_2097 | DJ90_2086 | DJ90_2097 | Hypothetical protein. | Hypothetical protein. | 0.765 |
DJ90_2086 | DJ90_338 | DJ90_2086 | DJ90_338 | Hypothetical protein. | Hydantase: amidase, hydantoinase/carbamoylase family protein. | 0.593 |
DJ90_2086 | allB | DJ90_2086 | DJ90_2091 | Hypothetical protein. | Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. | 0.690 |
DJ90_2086 | allC | DJ90_2086 | DJ90_2093 | Hypothetical protein. | Allantoate amidohydrolase. | 0.734 |
DJ90_2086 | allC-2 | DJ90_2086 | DJ90_2094 | Hypothetical protein. | Allantoate amidohydrolase. | 0.732 |
DJ90_2086 | allD | DJ90_2086 | DJ90_2096 | Hypothetical protein. | allD: ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.686 |
DJ90_2087 | DJ90_2086 | DJ90_2087 | DJ90_2086 | coA-ligase family protein. | Hypothetical protein. | 0.973 |
DJ90_2087 | DJ90_2088 | DJ90_2087 | DJ90_2088 | coA-ligase family protein. | Alpha/beta hydrolase fold family protein. | 0.857 |
DJ90_2087 | DJ90_2092 | DJ90_2087 | DJ90_2092 | coA-ligase family protein. | Putative allantoin permease. | 0.668 |
DJ90_2087 | DJ90_2095 | DJ90_2087 | DJ90_2095 | coA-ligase family protein. | Hypothetical protein; pucR C-terminal helix-turn-helix domain protein. | 0.758 |
DJ90_2087 | DJ90_2097 | DJ90_2087 | DJ90_2097 | coA-ligase family protein. | Hypothetical protein. | 0.763 |
DJ90_2087 | DJ90_338 | DJ90_2087 | DJ90_338 | coA-ligase family protein. | Hydantase: amidase, hydantoinase/carbamoylase family protein. | 0.581 |
DJ90_2087 | allB | DJ90_2087 | DJ90_2091 | coA-ligase family protein. | Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. | 0.666 |
DJ90_2087 | allC | DJ90_2087 | DJ90_2093 | coA-ligase family protein. | Allantoate amidohydrolase. | 0.730 |
DJ90_2087 | allC-2 | DJ90_2087 | DJ90_2094 | coA-ligase family protein. | Allantoate amidohydrolase. | 0.714 |
DJ90_2087 | allD | DJ90_2087 | DJ90_2096 | coA-ligase family protein. | allD: ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.712 |
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