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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_230Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein. (507 aa)    
Predicted Functional Partners:
xylA-4
Beta-xylosidase; xylose_isom_A: xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.827
araD
araD: L-ribulose-5-phosphate 4-epimerase.
  
 
 0.806
gnd-2
Gnd_rel: 6-phosphogluconate dehydrogenase.
  
 
 0.792
gnd
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.783
DJ90_5758
GMC oxidoreductase family protein.
   
 
  0.746
DJ90_3434
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
  
 
 0.742
rhaA
rhaA: L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
 
 0.724
DJ90_231
Short chain dehydrogenase family protein.
 
 
  0.722
rhaU
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.702
DJ90_4669
Lactonase, 7-bladed beta-propeller family protein.
     
 0.658
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
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