Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_1451 | DJ90_3006 | DJ90_1451 | DJ90_3006 | Aminotransferase class-V family protein. | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | 0.974 |
DJ90_1451 | sufB | DJ90_1451 | DJ90_2338 | Aminotransferase class-V family protein. | sufB: FeS assembly protein SufB. | 0.762 |
DJ90_1451 | sufB-2 | DJ90_1451 | DJ90_3005 | Aminotransferase class-V family protein. | sufB: FeS assembly protein SufB. | 0.762 |
DJ90_1451 | sufC | DJ90_1451 | DJ90_2336 | Aminotransferase class-V family protein. | sufC: FeS assembly ATPase SufC. | 0.774 |
DJ90_1451 | sufC-2 | DJ90_1451 | DJ90_3009 | Aminotransferase class-V family protein. | sufC: FeS assembly ATPase SufC. | 0.776 |
DJ90_1451 | sufD | DJ90_1451 | DJ90_2337 | Aminotransferase class-V family protein. | sufD: FeS assembly protein SufD. | 0.791 |
DJ90_2335 | DJ90_2339 | DJ90_2335 | DJ90_2339 | marR family protein. | Hypothetical protein. | 0.501 |
DJ90_2335 | sufB | DJ90_2335 | DJ90_2338 | marR family protein. | sufB: FeS assembly protein SufB. | 0.630 |
DJ90_2335 | sufC | DJ90_2335 | DJ90_2336 | marR family protein. | sufC: FeS assembly ATPase SufC. | 0.800 |
DJ90_2335 | sufD | DJ90_2335 | DJ90_2337 | marR family protein. | sufD: FeS assembly protein SufD. | 0.744 |
DJ90_2339 | DJ90_2335 | DJ90_2339 | DJ90_2335 | Hypothetical protein. | marR family protein. | 0.501 |
DJ90_2339 | sufB | DJ90_2339 | DJ90_2338 | Hypothetical protein. | sufB: FeS assembly protein SufB. | 0.634 |
DJ90_2339 | sufC | DJ90_2339 | DJ90_2336 | Hypothetical protein. | sufC: FeS assembly ATPase SufC. | 0.547 |
DJ90_2339 | sufD | DJ90_2339 | DJ90_2337 | Hypothetical protein. | sufD: FeS assembly protein SufD. | 0.527 |
DJ90_3006 | DJ90_1451 | DJ90_3006 | DJ90_1451 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | Aminotransferase class-V family protein. | 0.974 |
DJ90_3006 | DJ90_5464 | DJ90_3006 | DJ90_5464 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | Beta-eliminating lyase family protein. | 0.984 |
DJ90_3006 | sufB | DJ90_3006 | DJ90_2338 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | sufB: FeS assembly protein SufB. | 0.897 |
DJ90_3006 | sufB-2 | DJ90_3006 | DJ90_3005 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | sufB: FeS assembly protein SufB. | 0.980 |
DJ90_3006 | sufC | DJ90_3006 | DJ90_2336 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | sufC: FeS assembly ATPase SufC. | 0.896 |
DJ90_3006 | sufC-2 | DJ90_3006 | DJ90_3009 | SUF_scaf_2: SUF system FeS assembly protein, NifU family. | sufC: FeS assembly ATPase SufC. | 0.979 |
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